PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027046.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 288aa    MW: 31894.1 Da    PI: 7.1415
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027046.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019109131123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C+ C++ Fs++  L  H++ H
  Oeu027046.1 109 FTCSFCKREFSTSQALGGHQNAH 131
                  89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MKIHGQEPCQ SEASSISAAS EQAHVIKYSD DDQKKNPKMK EKVEEGYDSK PELDLKLAAN  60
DELTNNDNND VAAASNFELN LFNSLNSGSS PASKSSDDGS KRRTETKTFT CSFCKREFST  120
SQALGGHQNA HKQERALAKR CHGVAEAAAA TPFGHHPAYS CYPYSIFPQV PFYGSFNRSS  180
LGVRPESMIH KQSYNPYDIR FGREKISRAF FMNPDLQGLS YNQINGGFGL EKFEKRGSIL  240
DLGHNHIDLD HHNSSTSKRN EGNSQRLRLG SLNQPDDESG LDLNLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.15e-24C2H2 family protein