PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu026731.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 265aa    MW: 29612 Da    PI: 10.3577
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu026731.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-08170210954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r+RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  Oeu026731.1 170 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 210
                  69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MFSSDCKALW NPNSSAPMIK SNGTSSSTVK HCTNKTISQV STHEYVTQSK SSGANKPNPY  60
KRSRSESQLT VPNGLQYQNL DFHQSNYSTN PPKSKKPRSD NHSSSSNINF QQPTSYASSM  120
DEPDSEAIEQ MKEMIYRAAA FRPVSFGAEA VEKPKRKNVR ISNDPQTVAA RQRRERISER  180
IRVLQRLVPG GSKMDTASML DEAANYLKFL RSQIKALEAF GQKIDTTANF PTVTNTAFYT  240
FNPPFAMQNQ FSLQNPNPIH QSRS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.15e-60bHLH family protein