PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu026656.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 540aa MW: 58905.6 Da PI: 5.2253

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu026656.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	38	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+v+++G g+W+++ ++ g+ R++k+c++rw ++l Oeu026656.1 38 KGPWTSTEDAILIDYVTKHGEGNWNAVQKCSGLARCGKSCRLRWANHL 85 79******************************************9986 PP
2	Myb_DNA-binding	47.8	3.4e-15	91	134	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T eE+ ++++++ ++G++ W++ a++++ gRt++++k++w++ Oeu026656.1 91 KGAFTLEEERRIIELHVKMGNK-WARMAAELP-GRTDNEIKNYWNT 134 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MKSKSEEKMI SKNSVDDSPY VEEGNSGGNV GGNGPLKKGP WTSTEDAILI DYVTKHGEGN 60 WNAVQKCSGL ARCGKSCRLR WANHLRPDLK KGAFTLEEER RIIELHVKMG NKWARMAAEL 120 PGRTDNEIKN YWNTRIKRRQ RAGLPIYPPD ICTQALNDNQ HHENMDNFSS GDIQQSDFLS 180 MNVFEIPQFN GMELNRQLYT PALLDIPASS LLDIPASSLL VEGLDSSYPS KSLLCTMHPS 240 KHPRGPESMF YGVNAPIGGV LQGSSQYPND GSMRIVQSFG FSSAYDHDSS SNHALSSSLI 300 PGSHAIMNGN PSSSEPDWAM KLELPSLQTQ MGSWGSPYSP LPSLESVDTL IQSPPTELTQ 360 SCSLSPRNSG LLDAVLYESQ MKKNSKNSCQ LTSPASTMPV DVLDTSSHEL HEMEWEVYGD 420 PISPFGHSSS SVFSEYTHMS GNSVDEPPSA ETMPGFKVKE AEAGTEKQII FSRPDFLLAS 480 SCSGLYKDPT KDYSLLKDAF GPFLGDDLGK DCKQIDTSAS SSGQGREHDS HACNAVSTA*

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MKSKSEEKMI SKNSVDDSPY VEEGNSGGNV GGNGPLKKGP WTSTEDAILI DYVTKHGEGN  60
WNAVQKCSGL ARCGKSCRLR WANHLRPDLK KGAFTLEEER RIIELHVKMG NKWARMAAEL  120
PGRTDNEIKN YWNTRIKRRQ RAGLPIYPPD ICTQALNDNQ HHENMDNFSS GDIQQSDFLS  180
MNVFEIPQFN GMELNRQLYT PALLDIPASS LLDIPASSLL VEGLDSSYPS KSLLCTMHPS  240
KHPRGPESMF YGVNAPIGGV LQGSSQYPND GSMRIVQSFG FSSAYDHDSS SNHALSSSLI  300
PGSHAIMNGN PSSSEPDWAM KLELPSLQTQ MGSWGSPYSP LPSLESVDTL IQSPPTELTQ  360
SCSLSPRNSG LLDAVLYESQ MKKNSKNSCQ LTSPASTMPV DVLDTSSHEL HEMEWEVYGD  420
PISPFGHSSS SVFSEYTHMS GNSVDEPPSA ETMPGFKVKE AEAGTEKQII FSRPDFLLAS  480
SCSGLYKDPT KDYSLLKDAF GPFLGDDLGK DCKQIDTSAS SSGQGREHDS HACNAVSTA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	2e-89	MYB family protein