PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu026517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | AP2 | ||||||||
Protein Properties | Length: 220aa MW: 25185.2 Da PI: 10.4485 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 19 | 67 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ V +++ +g+W+AeIrdp + + +r++lg+f+tae A a+++a+++++g Oeu026517.1 19 HRVVKQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAASYAYDEAALRFKG 67 799*****.**********9...3.35************************988 PP | |||||||
2 | AP2 | 57.4 | 3.6e-18 | 152 | 200 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +k V +++ +g+W+AeIrdp + + +r++lg+f+tae Aa a+++a+++++g Oeu026517.1 152 HKVVKQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAAAHAYDEAALRFKG 200 899*****.**********9...3.35************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MMCINIHKGS PDQQRRRDHR VVKQRPWGKW AAEIRDPNKA ARVWLGTFDT AEAASYAYDE 60 AALRFKGNKA KLNFPERVQG KTACYLTTRR DLPVVSESTT QTYRPLSQEN RFNVQNYAEF 120 LRRGDDSNLN YGVSGFYYHG YGSPDQQRRR DHKVVKQRPW GKWAAEIRDP NKAARVWLGT 180 FDTAEAAAHA YDEAALRFKG NKAKLNFPER VQGKTASVT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 6e-30 | ERF family protein |