PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu026349.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 344aa MW: 38032.9 Da PI: 10.005

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu026349.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.7	3.1e-18	41	131	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 +W+ +e+ aLi+a+++++ +l rg+l++ +W+ev++ + ++++qC++k+e+l+kry+++ +++ +s+ ss++++f++++ Oeu026349.1 41 CWSADETVALIDAYKDKWYSLCRGNLRAFHWQEVANDVayrCPSSPAKTSVQCRHKMEKLRKRYRAEIQRAAAFggSSRFSSSWVHFQRMH 131 7***********************************7644445589**************998887643499**********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MATIFSPSSP SGNVDHIPTA TLAVPSIAIS ASASRRLPPP CWSADETVAL IDAYKDKWYS 60 LCRGNLRAFH WQEVANDVAY RCPSSPAKTS VQCRHKMEKL RKRYRAEIQR AAAFGGSSRF 120 SSSWVHFQRM HSMEKGPNST PPSSDDDLPE EDHKNSIKRI NEVYNNNGYN NQKASFGNQG 180 PRTRINGTTT GCRIRIPGQG ISGPSARKFS SKFDEMGSLF SDNSSCNFNS SAGGYGNSTQ 240 VLQDGFLGSC ELEKRGDENG NRRKGDNGVG QVAAAIRALG EGFVRIEKVK MGMARRIEEM 300 RMEMELKRTE MILGSQQRIV EAFVEAISER KTKKAKKMMM PEL*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MATIFSPSSP SGNVDHIPTA TLAVPSIAIS ASASRRLPPP CWSADETVAL IDAYKDKWYS  60
LCRGNLRAFH WQEVANDVAY RCPSSPAKTS VQCRHKMEKL RKRYRAEIQR AAAFGGSSRF  120
SSSWVHFQRM HSMEKGPNST PPSSDDDLPE EDHKNSIKRI NEVYNNNGYN NQKASFGNQG  180
PRTRINGTTT GCRIRIPGQG ISGPSARKFS SKFDEMGSLF SDNSSCNFNS SAGGYGNSTQ  240
VLQDGFLGSC ELEKRGDENG NRRKGDNGVG QVAAAIRALG EGFVRIEKVK MGMARRIEEM  300
RMEMELKRTE MILGSQQRIV EAFVEAISER KTKKAKKMMM PEL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	5e-40	Trihelix family protein