PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025933.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 447aa MW: 49738.1 Da PI: 6.3904

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025933.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7.4e-05	17	40	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C C+++Fs+ L+ H+++ H Oeu025933.1 17 HYCVECKMTFSSGKALRDHMNRaH 40 68*******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MKKNSDEKKD GRKVKDHYCV ECKMTFSSGK ALRDHMNRAH AQSNRDFSVK KQKSKMEFEA 60 MNRVPSHVLD GDRINSGHVF GLNESMKWQV TGMRGRAATK QVIDSPLLAI SDEFLASLHE 120 LMSASNGDSM KPSEDLDSKV KEGEANSSKF KGSRTPIKPV IGLSPFPSSE EFLRLINGDS 180 KKPSEDLESK VREGEIDGVN QDFQSNKNNE VLSFADERNS PAKKLKIFER ADENPGGKQF 240 RRIDYNGKGN RKLYPGFQTE NSTNSSMNPG DNPYESGTNG SMMIKKKSMD PESLLDFTPV 300 EPEAAKDNYS TCEKSFPTCQ AMGRHRSSSH KEKKVKVKIY NTVADPSLNG AAYANATEQM 360 EVNSVSKKSA FSLKAVYNIY DFIICDNNFP PDQASGFQNH ADHVPRSHQV TSTDEEKEDP 420 NVFEFNLNEP PDHDDEDGME PGSSAS*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MKKNSDEKKD GRKVKDHYCV ECKMTFSSGK ALRDHMNRAH AQSNRDFSVK KQKSKMEFEA  60
MNRVPSHVLD GDRINSGHVF GLNESMKWQV TGMRGRAATK QVIDSPLLAI SDEFLASLHE  120
LMSASNGDSM KPSEDLDSKV KEGEANSSKF KGSRTPIKPV IGLSPFPSSE EFLRLINGDS  180
KKPSEDLESK VREGEIDGVN QDFQSNKNNE VLSFADERNS PAKKLKIFER ADENPGGKQF  240
RRIDYNGKGN RKLYPGFQTE NSTNSSMNPG DNPYESGTNG SMMIKKKSMD PESLLDFTPV  300
EPEAAKDNYS TCEKSFPTCQ AMGRHRSSSH KEKKVKVKIY NTVADPSLNG AAYANATEQM  360
EVNSVSKKSA FSLKAVYNIY DFIICDNNFP PDQASGFQNH ADHVPRSHQV TSTDEEKEDP  420
NVFEFNLNEP PDHDDEDGME PGSSAS*