PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025765.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 430aa MW: 47388.4 Da PI: 8.9874

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025765.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.7e-05	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F r nL+ H r H Oeu025765.1 78 FVCEICSRGFQRDQNLQLHRRGH 100 89*******************88 PP
2	zf-C2H2	12.4	0.00047	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Oeu025765.1 154 WKCEKCSKIYAVQSDWKAHSKTC 176 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MFPAVMSNSN SLSEEASVSS GPRVHEFGCS FNPMIQTQSM STQQPQKIKK KRNLPGNPDP 60 DAEVIALSPK TLLATNRFVC EICSRGFQRD QNLQLHRRGH SLPWKLKQRD CKENKKRVYV 120 CPEPTCVHSH PSRALGDLTG IKKHYCRKHG EKKWKCEKCS KIYAVQSDWK AHSKTCGTRE 180 YRCDCGTLFS RKDSFITHRA FCDALAEETA RLSAANSILA SGQNPNNEQQ PPRTAATFHF 240 NHQNPSSLFS FSAQPRHFPN PPPQITALLH PTCDPPQNHY PNNNVQIKPE SIHIPLSSPF 300 YQDPLHKGLM TSPFHGLQVS TGGAPLSATA LLQKAATVAT VHSVGQVSST MAQLDMGHMN 360 TTDGGFPAGN IVTWQETDRF TRDFLGLKGN HCGGGSNNGS SGDLLSYAGG VEYPTYDREH 420 SLLKHQGGF*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MFPAVMSNSN SLSEEASVSS GPRVHEFGCS FNPMIQTQSM STQQPQKIKK KRNLPGNPDP  60
DAEVIALSPK TLLATNRFVC EICSRGFQRD QNLQLHRRGH SLPWKLKQRD CKENKKRVYV  120
CPEPTCVHSH PSRALGDLTG IKKHYCRKHG EKKWKCEKCS KIYAVQSDWK AHSKTCGTRE  180
YRCDCGTLFS RKDSFITHRA FCDALAEETA RLSAANSILA SGQNPNNEQQ PPRTAATFHF  240
NHQNPSSLFS FSAQPRHFPN PPPQITALLH PTCDPPQNHY PNNNVQIKPE SIHIPLSSPF  300
YQDPLHKGLM TSPFHGLQVS TGGAPLSATA LLQKAATVAT VHSVGQVSST MAQLDMGHMN  360
TTDGGFPAGN IVTWQETDRF TRDFLGLKGN HCGGGSNNGS SGDLLSYAGG VEYPTYDREH  420
SLLKHQGGF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-119	C2H2 family protein