PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu025715.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 561aa    MW: 62632.4 Da    PI: 4.8022
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu025715.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS434.86.2e-1331925603374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL+ecA a++ g++e+a+ +++ l++ +s +gdp +R+aay++eAL ar+a s+++lykal+++e +   ss +l+a+++++e +P+++f++ +aN 
  Oeu025715.1 192 RLLFECAAAIRVGNFEEASLMISYLRQKVSIQGDPSERIAAYMVEALTARMATSGKGLYKALKCKEPP---SSLRLSAMQVLFEGCPCFRFGFTAANG 286
                  79*****************************************************************9...99************************* PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aIlea++ e+rvHi+Dfdi+qG Q+ +Llq++a+ p++ p +R+Tgv++pes+  s   l+ +g+rL+++Ae l+++fef++ va +++ +++++L++
  Oeu025715.1 287 AILEAFKDETRVHIVDFDINQGSQYYTLLQTMAKIPGNRPLVRLTGVDDPESVqrSVGGLKVIGQRLEQLAEDLQLSFEFQA-VAAETALVSPSMLNC 383
                  ***************************************************9988999************************.7999*********** PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  +pgEal+Vn+++qlh+++desvs+ + rd++L++vk+l+Pk+v+vveq++++n+++Fl rf+ea +yy a+f+sl+a+lpr+s++r++vE+++l+r+i
  Oeu025715.1 384 QPGEALIVNFAFQLHHMPDESVSTVNLRDQLLRMVKGLNPKLVTVVEQDVNTNTAPFLPRFAEAYNYYFAVFESLDATLPRNSQDRMNVEKHCLARDI 481
                  ************************************************************************************************** PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  vn+vaceg+er+er e ++kWr+r+++aGF+p p+s+++ ++++ ++++++++ ++v+ee g+l +gW+d+ L+++SaWr
  Oeu025715.1 482 VNIVACEGEERIERYEVAGKWRARMRMAGFNPCPISQNVSTEIRKVIKQYSNR-FKVKEETGALHFGWEDKILIVTSAWR 560
                  ***************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    
MSLVRPAALF GNHERHSLCE GNDSSGLSTS VFNSDNQGIV YTTESCRSES FDQKYFFDSP  60
SEELVHTSDS DVLKNAFHRS HSSSFVVSYD FDYESEYING QSPDAVEYDE DKIKLKLQEL  120
ETVLLDDNAT NVDDAAAFGT DHNMEIDGEW SDQILNGLLH ESPKESSSSV SNPSSISSSK  180
EISITNLQTP KRLLFECAAA IRVGNFEEAS LMISYLRQKV SIQGDPSERI AAYMVEALTA  240
RMATSGKGLY KALKCKEPPS SLRLSAMQVL FEGCPCFRFG FTAANGAILE AFKDETRVHI  300
VDFDINQGSQ YYTLLQTMAK IPGNRPLVRL TGVDDPESVQ RSVGGLKVIG QRLEQLAEDL  360
QLSFEFQAVA AETALVSPSM LNCQPGEALI VNFAFQLHHM PDESVSTVNL RDQLLRMVKG  420
LNPKLVTVVE QDVNTNTAPF LPRFAEAYNY YFAVFESLDA TLPRNSQDRM NVEKHCLARD  480
IVNIVACEGE ERIERYEVAG KWRARMRMAG FNPCPISQNV STEIRKVIKQ YSNRFKVKEE  540
TGALHFGWED KILIVTSAWR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein