PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu025250.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 322aa    MW: 35946.1 Da    PI: 6.7231
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu025250.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.62.6e-171360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEd++lv+ ++ +G g+W+++++  g+ R++k+c++rw +yl
      Oeu025250.1 13 RGLWSPEEDDKLVKHITVHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 60
                     788*******************************************97 PP
2Myb_DNA-binding52.51.1e-1666109146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T++E+  ++d+++ lG++ W+ Ia++++ gRt++++k++w++
      Oeu025250.1  66 RGSFTEQEERTIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                      89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGHHCCSKQK VKRGLWSPEE DDKLVKHITV HGHGCWSSVP KLAGLQRCGK SCRLRWINYL  60
RPDLKRGSFT EQEERTIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL  120
DPNTHNLLLS SNQTKVLKNN INASNSFQQE TPAFTMETSS KTASASDLAT LLPRINIPQY  180
DHNNTIQYTG GSDQYQNSSM LLGTQQRISQ SDLSALGFAN CSSVESSNVM SSSGFGTLNE  240
SCMWDAGGIE FPFEQQKTDD HIVMAPQQEQ NINELNRSDH LQNVGGNTFD STCFDFDFVD  300
SALLPSGVYC NVNSMDQLAW D*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.11e-82MYB family protein