PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu025236.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 359aa MW: 40404.9 Da PI: 9.0314

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu025236.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.5	2.1e-12	184	230	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK++Ka++L A++YIk Lq Oeu025236.1 184 DHVIAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKYIKVLQ 230 5999*********************.....9**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MRRYRSRAPP QGAPPLAGHG SMVHFAGKSI GFLILLMEIA SIRSLSDLAM DESGLVHQWP 60 VNSFDDLSTM SICTAFGEDF YQSFSQPTLN FKRAADFSQY GFERTPKQLK TNTWPNPSNN 120 LNSMNSCFTN QLEMANPKEE TWSSSSTLNF SNDSVVSQAK NYTLKACPGN KRISTNDRYS 180 HGQDHVIAER KRREKLSQRF IALSALVPGL KKMDKASVLG DAIKYIKVLQ DRVKTLEEQT 240 RKKSMESVVF VKKYEIYTGN ENSPSDENFI DEPLPEIEAR FSDNKDVLVR IHCEKRKGIL 300 EKTVAEIEKL HLSVVNSSSL TFGDSALDIT VIAKMDEVYN MSSKDFLKNL RAALKTFI*

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MRRYRSRAPP QGAPPLAGHG SMVHFAGKSI GFLILLMEIA SIRSLSDLAM DESGLVHQWP  60
VNSFDDLSTM SICTAFGEDF YQSFSQPTLN FKRAADFSQY GFERTPKQLK TNTWPNPSNN  120
LNSMNSCFTN QLEMANPKEE TWSSSSTLNF SNDSVVSQAK NYTLKACPGN KRISTNDRYS  180
HGQDHVIAER KRREKLSQRF IALSALVPGL KKMDKASVLG DAIKYIKVLQ DRVKTLEEQT  240
RKKSMESVVF VKKYEIYTGN ENSPSDENFI DEPLPEIEAR FSDNKDVLVR IHCEKRKGIL  300
EKTVAEIEKL HLSVVNSSSL TFGDSALDIT VIAKMDEVYN MSSKDFLKNL RAALKTFI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	194	ERKRRE
2	190	195	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-64	bHLH family protein