PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu025006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 214aa MW: 25041.2 Da PI: 8.4653 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.5 | 2.6e-12 | 25 | 70 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ed +l+ +v q+G g W Ia++m R +kqc++rw+++l Oeu025006.1 25 GQWIGKEDRRLISLVIQFGLGKWVVIAEEMV-SRVGKQCRERWNNHL 70 677778*************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 42.5 | 1.5e-13 | 78 | 118 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT++E+ l++a++ G++ W+ Ia++++ gRt +++k+ w+ Oeu025006.1 78 IWTKDEERWLIQAHEGQGNR-WAEIAKYIP-GRTKNSIKNNWN 118 6*******************.*********.*********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MAAPVNPDWK EKRGGSSSSR YQIKGQWIGK EDRRLISLVI QFGLGKWVVI AEEMVSRVGK 60 QCRERWNNHL RPHIKKDIWT KDEERWLIQA HEGQGNRWAE IAKYIPGRTK NSIKNNWNAT 120 KRRQISRRRN DEMDFMKTLF ENNQSIDSIP VDHCQLMNPA EGTSENTYSF NIEENYNHPT 180 IFFTSLEILQ TTDSQLPAVE YVENDLFHYC VLA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11050.1 | 2e-46 | MYB family protein |