PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024993.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 271aa    MW: 29607.8 Da    PI: 7.9834
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024993.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26033.51.2e-101101535497
       DUF260  54 redamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                   + +++sl++eA+ r+ +Pv+Gavg++++++++l+q+++e++l+
  Oeu024993.1 110 SRGLFQSLLFEACGRTVNPVNGAVGLLWTGNWHLCQSAVETVLR 153
                  56789*********************************998775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MNAIGRQRSG SSSTMHHQRK YSDNFLESSS NDRWLQSAGL QHLQSSNNAV PLLQAQRTYG  60
GRSDLFAEPL TPPLNSRPGS QRRNGEEQGS RGGGGCGIDG GRQIWAEMGS RGLFQSLLFE  120
ACGRTVNPVN GAVGLLWTGN WHLCQSAVET VLRGGVLRPL PKFSGLIQSP EFDEGSEANN  180
TDLYKSQDLN LRVKREGFDD GPSDLNLGLA GGFPEKMTAG RRKNRPPEER RPASPSDESE  240
TTTLESGLLC NQELQQNHPG RESKLLRLFF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.16e-29LBD family protein