PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024869.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 237aa MW: 25398.9 Da PI: 8.7309

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024869.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.8	5.6e-41	41	140	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++ e +r da++slv+eA++r+rdPvyG++g i++lqqq+++l+ael++++ Oeu024869.1 41 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVAEPQRADAANSLVFEANVRLRDPVYGCMGAISALQQQVQTLQAELNAVR 138 7***********************************************************************************************99 PP DUF260 99 ee 100 +e Oeu024869.1 139 AE 140 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSRLREGFDE IGKNLMTREI DAVMGRRHML GPPGNLNTVT PCAACKLLRR RCAEECPFSP 60 YFSPHEPQKF AAVHKVFGAS NVSKMLMEVA EPQRADAANS LVFEANVRLR DPVYGCMGAI 120 SALQQQVQTL QAELNAVRAE ILRYKYREAA NTFIASNNVA ALFPSGTVSV AELPQAPPTP 180 TTSRTAAAAP PPTTPPPPPP TASVVSSSSS APSLYTSPPS TASFNNISNN NIPYFH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	2e-79	LBD family protein