PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu024598.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | FAR1 | ||||||||
Protein Properties | Length: 187aa MW: 21631.8 Da PI: 10.3691 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.7 | 6.8e-22 | 34 | 130 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY +YA+evGFs r +s k+ ++e+ +++fvC+keg+ +++ +k +++++r+r + r+gCkakl++ k + +w vt++++ HnH+l+ Oeu024598.1 34 EFYYTYAREVGFSARLFNSMKRPGTNEVFWKQFVCYKEGEIDDTYQKkfkhmvERSSKRHRGVIRVGCKAKLTIVSPKsSINWIVTNFVESHNHALT 130 6*********************9*****************99998888999998999999************998887799**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MKDETSIQTF TPQVAKERKP KVGQKFEIIE GAYEFYYTYA REVGFSARLF NSMKRPGTNE 60 VFWKQFVCYK EGEIDDTYQK KFKHMVERSS KRHRGVIRVG CKAKLTIVSP KSSINWIVTN 120 FVESHNHALT TPTRVHLLRS HRHVSNAKKG INTTILRSKC IGESTDKFEG DWIQGSSKIL 180 VYIERH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-24 | FAR1 family protein |