PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024249.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 305aa    MW: 34185 Da    PI: 8.7088
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024249.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.63.2e-191562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd++l+d+++++G+g+W + +++ g++R++k+c++rw +yl
      Oeu024249.1 15 KGPWTLEEDKKLIDYIHKHGKGSWQLLPKKAGLNRCGKSCRLRWTNYL 62
                     79********************************************97 PP
2Myb_DNA-binding52.61.1e-1668112147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++ ++E++ +++++ +lG++ W+tIa++++ gRt++++k++w++ 
      Oeu024249.1  68 RGNFAPDEEQTIICLHSLLGNK-WSTIASHLP-GRTDNEIKNFWNTN 112
                      8999******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGRSPSSITD NRLKKGPWTL EEDKKLIDYI HKHGKGSWQL LPKKAGLNRC GKSCRLRWTN  60
YLRPDIKRGN FAPDEEQTII CLHSLLGNKW STIASHLPGR TDNEIKNFWN TNLRKKLLRS  120
GIDPNTHQPI TDANLLLNLL PASGVTNLMD PWKYVLKLQE DRVTEFAKNR VLQNILRVLS  180
TSPLPIIDTN CLGESHNPSQ YGELINRIDP FQLLSYPLLP DIANIEALPE ELATIFNSKE  240
TIPEILDNQI NGFGISKSHA EYSLPGLVSA NTGTSTANLM DSINSMHNPN QSPTSNCLKT  300
WGIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.21e-73MYB family protein