PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu024227.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 276aa    MW: 31977.6 Da    PI: 6.3496
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu024227.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.82.9e-141562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l +++ ++G g+W++++   g++R +k+c++rw +yl
      Oeu024227.1 15 KGLWSPDEDQKLRNYILKHGYGCWSSVPINTGLKRNGKSCRLRWINYL 62
                     678*****************************9*************97 PP
2Myb_DNA-binding54.92e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++teE+e ++ +++ lG++ W+ Ia++++ gRt++++k++w+++l
      Oeu024227.1  68 RGTFSTEEEETILTLHQTLGNK-WSQIAHHLP-GRTDNEIKNYWHSHL 113
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MECKLFDKPK NKHKKGLWSP DEDQKLRNYI LKHGYGCWSS VPINTGLKRN GKSCRLRWIN  60
YLRPGLKRGT FSTEEEETIL TLHQTLGNKW SQIAHHLPGR TDNEIKNYWH SHLKKKVAKL  120
YETETQAKDV STGGEMENLN SSSSLNSTTQ NSSFNSIEHM EGSLMDTDQS TKQKNQAQNF  180
NLPKILFAEW FSLDQFHGKD LQNSSFFNNN FDNPNTNFQD ESIRGLRLDD QTVEMEMHTQ  240
PNNSSVDIFF PPFDQDLLLD YFPGEFSMSY DELYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.19e-59MYB family protein