PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu024216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 133aa MW: 15730 Da PI: 10.1692 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.9 | 4.6e-20 | 47 | 99 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++++q + Le+ Fe ++++ e++ +LA+ lgL+ rqV vWFqNrRa++k Oeu024216.1 47 KRKLSEQQMNLLEQSFEDEHKLESERKDKLASDLGLDPRQVAVWFQNRRARWK 99 45899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 114.3 | 7.4e-37 | 46 | 128 | 2 | 84 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekev 84 +kr+ls++q++lLE+sFe e+kLe+erK +la++Lgl+prqvavWFqnrRAR+k+k++E++y++Lk+++++ + e++rLe+ev Oeu024216.1 46 RKRKLSEQQMNLLEQSFEDEHKLESERKDKLASDLGLDPRQVAVWFQNRRARWKSKKMEEEYSKLKTQHETTVVEKCRLENEV 128 8*******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MVLISQYYTG VVYDQLLPEQ VEAKARPRRR RKKNKGEAGS CSGVMRKRKL SEQQMNLLEQ 60 SFEDEHKLES ERKDKLASDL GLDPRQVAVW FQNRRARWKS KKMEEEYSKL KTQHETTVVE 120 KCRLENEVRI FL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 49 | RRRRKKNKGEAGSCSGVMRKRK |
2 | 29 | 50 | RRRRKKNKGEAGSCSGVMRKRK |
3 | 30 | 51 | RRRRKKNKGEAGSCSGVMRKRK |
4 | 31 | 52 | RRRRKKNKGEAGSCSGVMRKRK |
5 | 46 | 75 | RKRKLSEQQMNLLEQSFEDEHKLESERKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 5e-48 | HD-ZIP family protein |