PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu024062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 369aa MW: 41807.3 Da PI: 7.4345 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.5 | 2.3e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G+ +W+t ++ g+ R +k+c++rw +yl Oeu024062.1 13 KGPWTPEEDMKLIQYIQVHGPCNWRTLPKNAGLQRHGKSCRLRWTNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45 | 2.4e-14 | 66 | 129 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT..................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..................tWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ +W++ a++++ gRt++++k++w+++ Oeu024062.1 66 RGRFSFEEEETIIQLHSVLGNKykfclscimlnlnlflliRWSAMAARLP-GRTDNEIKNYWNTH 129 89************************************************.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MGRSPCEKNG VIKGPWTPEE DMKLIQYIQV HGPCNWRTLP KNAGLQRHGK SCRLRWTNYL 60 RPGIKRGRFS FEEEETIIQL HSVLGNKYKF CLSCIMLNLN LFLLIRWSAM AARLPGRTDN 120 EIKNYWNTHI RKRLLRNGID PVTHAQRLDF KDLSSLLNLP QINLSNLLRL QTLLINPEAL 180 RLAAYLLENP ELLLTKLQEN QLFNAQLQNQ TPVFQTDQLQ NTFDLQTPLC NPSTDLPVTA 240 SVSNQSHLIQ GNMGQISKNS DSLSGQTFQN NTTTFENVSF IENFLFGASD QRQKDLSENI 300 SFQSLNSGSN SSKNFSFDSV LSTPLSSPTP LISSSTYMNG NTEDERESNC SNLLKFAIPE 360 SLDFDDFI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 7e-76 | MYB family protein |