PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu024030.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SRS

Protein Properties

Length: 345aa MW: 36954.4 Da PI: 6.5013

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu024030.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	231	2.1e-71	123	276	3	155
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa....aeaaskrkrelkskkqsalsstklssaes 96 g++sCqdCGnqakkdC+++RCRtCCksrgf+C+thvkstWvpaakrrerqqqlaa+++++++++ +++++kr+re+ +++s+l +t++ +s Oeu024030.1 123 GGGISCQDCGNQAKKDCSYMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQEQQEEHNqqqpHRDTAKRQREN-PNASSSLVCTRILADTS 219 5789**************************************************999988877666677777777775.88999999999988875 PP DUF702 97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGleek 155 le ++P+ev+sea frcvrvs++dd+e+++aYqtav+igGhvfkGiLydqGle++ Oeu024030.1 220 --GLELGNFPSEVNSEAAFRCVRVSAIDDAEDQYAYQTAVNIGGHVFKGILYDQGLENQ 276 ..588899**********************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MAGFFSLGGG GGGGRGGTNS SNQEQESSSH HNNPPSEINP ESWFLFRNED IPYKSFELWQ 60 NHPNQQENQH FLQRQNQNPL QDLYASAGGL AVGPSRTGFE ISNDPPRSGF LMMRSSGGAG 120 GSGGGISCQD CGNQAKKDCS YMRCRTCCKS RGFQCQTHVK STWVPAAKRR ERQQQLAALQ 180 EQQEEHNQQQ PHRDTAKRQR ENPNASSSLV CTRILADTSG LELGNFPSEV NSEAAFRCVR 240 VSAIDDAEDQ YAYQTAVNIG GHVFKGILYD QGLENQYIAG ETSSGGGSVS AGVQQLNLIT 300 GTANSAAATS AAGGGSSSFL DPSLYPAPLN TFMAGTQFFP PPRS*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MAGFFSLGGG GGGGRGGTNS SNQEQESSSH HNNPPSEINP ESWFLFRNED IPYKSFELWQ  60
NHPNQQENQH FLQRQNQNPL QDLYASAGGL AVGPSRTGFE ISNDPPRSGF LMMRSSGGAG  120
GSGGGISCQD CGNQAKKDCS YMRCRTCCKS RGFQCQTHVK STWVPAAKRR ERQQQLAALQ  180
EQQEEHNQQQ PHRDTAKRQR ENPNASSSLV CTRILADTSG LELGNFPSEV NSEAAFRCVR  240
VSAIDDAEDQ YAYQTAVNIG GHVFKGILYD QGLENQYIAG ETSSGGGSVS AGVQQLNLIT  300
GTANSAAATS AAGGGSSSFL DPSLYPAPLN TFMAGTQFFP PPRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	9e-74	SRS family protein