PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023842.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 339aa MW: 39262 Da PI: 5.2934

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023842.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.5	9.9e-25	8	104	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+++v++Li a+ +++++++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++d ++ Oeu023842.1 8 KWTDNMVRLLIMAVYYIGDEVGSEGndkkkggtvlQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDIVGKGiACRVVENQSLLDTMD 104 7************99888886423556788888******************************************89*********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MSPWHRMKWT DNMVRLLIMA VYYIGDEVGS EGNDKKKGGT VLQKKGKWKS VSRAMMEKGF 60 YVSPQQCEDK FNDLNKRYKR VNDIVGKGIA CRVVENQSLL DTMDNLSMKM KEEVKKLLNS 120 KHLFFREMCA YHNSCGHGTH DGGGGAQDSL AEPSQTQQQR WLHPSAKIKG SKVEKLVSIE 180 EENDEEDGDE DDDDDDDDEE EEDEDDDDPD EQSSRKRLKR GLFHSPMIQQ FSAELTNMLQ 240 DGTRSPSEKR QWMERRSIQL EEQRVGFQSQ AFEIEKQRLK WLKFSAKKER GMEREKLSNE 300 RLKLENERMV LLIRQKEIEL LDLQSSSNKR SDPSSITG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	4e-98	Trihelix family protein