PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023800.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 362aa    MW: 41166.6 Da    PI: 7.5581
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023800.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP128.18.9e-401122603135
          TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec...eaesssssasnsssg. 88 
                   kkdrhski T+ g+RdRR+Rls+++a +fF Lqd+LGfdk+skt++WL++++  ai el++         s ss sec   +       +s+   + 
  Oeu023800.3 112 SKKDRHSKINTAHGPRDRRMRLSLDVAYKFFGLQDMLGFDKASKTVDWLFKNSRSAIRELMQGscmykqtcSLSSTSECevvS---GIDDQSA---Ay 203
                  69************************************************************999998877555556774332...3333332...12 PP

          TCP  89 .........kaaksaa.kskksqksaasalnlakesrakarararertrekmriknk 135
                           k+  +++ ++k+++ks+ +   +akesr++ar+rar rt+ek++++++
  Oeu023800.3 204 enkstiiskKSDLDKPsCTKERKKSKVARATVAKESRKQARERARARTSEKNSLRES 260
                  2344577774444444477777777888899999*****************999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MYPSNNNCNF NSISCIDHEI SPTYFFDNDI NSITKEDHSF SSFFGFPNSP SMQYEYHQFD  60
DLFHEHNSLT TDENAVPAEI NATNMSKAAA TDSLKEDCYS KTEQQIPRKR SSKKDRHSKI  120
NTAHGPRDRR MRLSLDVAYK FFGLQDMLGF DKASKTVDWL FKNSRSAIRE LMQGSCMYKQ  180
TCSLSSTSEC EVVSGIDDQS AAYENKSTII SKKSDLDKPS CTKERKKSKV ARATVAKESR  240
KQARERARAR TSEKNSLRES EPKTANNHSS IRLRTHQLET GEESVIRSSN MNPSYKMLAE  300
VEELSSHRAQ ILGARYEDNW NASTILNYQH DAANPSHEPQ HTDFLFCTKP WDAYGCYNLS  360
G*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.23e-22TCP family protein