PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023631.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 173aa MW: 19866.8 Da PI: 10.3658

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023631.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	20.3	1.5e-06	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H Oeu023631.1 53 YVCEICNQGFQRDQNLQMHRRRH 75 9*********************9 PP
2	zf-C2H2	17.8	9.4e-06	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ Oeu023631.1 130 WVCEKCSKGYAVQSDYKAHLKTC 152 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MISNYLSSSS SQPSFSAENG NISKRKRRPA GTPDPDAEVV SLSPKTLLES DRYVCEICNQ 60 GFQRDQNLQM HRRRHKLPWK LQKRETPIVR PRVFVCPEPT CLHHDPRHAL GDLVGIKKHF 120 RRKHSNHKQW VCEKCSKGYA VQSDYKAHLK TCGTRGHSCD CGRVFSRYVR LI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	29	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	3e-99	C2H2 family protein