PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu023529.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 424aa MW: 47322.2 Da PI: 9.0345

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu023529.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	53	75	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H Oeu023529.1 53 YVCEICNQGFQRDQNLQMHRRRH 75 9*********************9 PP
2	zf-C2H2	16.1	3.1e-05	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ Oeu023529.1 130 WVCEKCSKGYAVQSDYKAHLKTC 152 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MLSSNNPSSF SEPFASSENE NNSKRKRRPA GTPDPDAEVV SLSPKTLLES DRYVCEICNQ 60 GFQRDQNLQM HRRRHKVPWK LLKRETPIAK KRVFVCPEPS CLHHDPCHAL GDLVGIKKHF 120 RRKHSNHKQW VCEKCSKGYA VQSDYKAHLK TCGTRGHSCD CGRVFSRVES FIEHQDSCSM 180 GRLRSEAHNN LQPAACLSRT ASSPSPSSDT NVTPIFSAPL SLPNPKMDTN FLRPAGDSSQ 240 NFKNSRLPNL ELQLLTKMDE NQSTQLQLSI GSSEISEKTE MDNANMCSSE KPNMAAAVPP 300 SRRLKEQAEE QFRLAMAEKA YAEDARQQAK RQIELAEQEF ANAKGIRQQA RAELEKALAL 360 KQHAINQNNS TTLQVTCHAC KQQFQASRSV TETLSANGNS LGLSYISSCS RERGIKKGDH 420 SDK*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MLSSNNPSSF SEPFASSENE NNSKRKRRPA GTPDPDAEVV SLSPKTLLES DRYVCEICNQ  60
GFQRDQNLQM HRRRHKVPWK LLKRETPIAK KRVFVCPEPS CLHHDPCHAL GDLVGIKKHF  120
RRKHSNHKQW VCEKCSKGYA VQSDYKAHLK TCGTRGHSCD CGRVFSRVES FIEHQDSCSM  180
GRLRSEAHNN LQPAACLSRT ASSPSPSSDT NVTPIFSAPL SLPNPKMDTN FLRPAGDSSQ  240
NFKNSRLPNL ELQLLTKMDE NQSTQLQLSI GSSEISEKTE MDNANMCSSE KPNMAAAVPP  300
SRRLKEQAEE QFRLAMAEKA YAEDARQQAK RQIELAEQEF ANAKGIRQQA RAELEKALAL  360
KQHAINQNNS TTLQVTCHAC KQQFQASRSV TETLSANGNS LGLSYISSCS RERGIKKGDH  420
SDK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	29	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-139	C2H2 family protein