PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu023243.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 285aa    MW: 32866.5 Da    PI: 4.1383
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu023243.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.83.2e-191057249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 +i+nk   qvtfskRr+g++KKA E S LC+a++ ++i s+ +k++++
  Oeu023243.1 10 KIDNKNSLQVTFSKRRTGLFKKAAETSLLCGANIVILIQSPGNKFFTF 57
                 69*********************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGRRKIEIRK IDNKNSLQVT FSKRRTGLFK KAAETSLLCG ANIVILIQSP GNKFFTFGEP  60
SVESILNRYQ FLDDSFSTES NPTAHNLLVE ERSENNGATR GFWWQKEKLE TMELQELEAF  120
EEKLNPLLQA GEMNRCQFLD DSFSTESNLT AHDPLVEERI ENDEATREFW WQKENLETMD  180
LQELEAFEEK LNPLLQAGEM NRCQFLDDSF STESDLTSHN LLVEERSEND EATREFGWEN  240
ENMEIVDLQE LEAFEEELKT LLQAGEMNKQ IASASCSMIP LPQQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-23M-type_MADS family protein