PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu022772.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 193aa    MW: 22251.6 Da    PI: 8.9892
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu022772.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.52.2e-151050242
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                  i n+  r  +f kR++gi  K +EL++LCd+++++ii++ 
  Oeu022772.1 10 YIANDAERRASFRKRKKGIVNKINELCTLCDIQACIIIYGA 50
                 589************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MTRGKIKLEY IANDAERRAS FRKRKKGIVN KINELCTLCD IQACIIIYGA YEPQPTVCPS  60
RLDAQQIISK FWEFPEVEQT QRLFNQESYT IQRVQKSRKQ AEKLQRINRI TDMEILMHQC  120
MAGLSSLQNV PLNDITEMGR LAEQNIQDIK TRMKELEKNW ATNLQMGETS STPPKDDAAG  180
PNFRELSLFH KS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-33M-type_MADS family protein