PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022767.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 479aa MW: 53613.2 Da PI: 8.0285

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022767.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.6e-16	22	67	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ Oeu022767.1 22 RGHWRPAEDARLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 67 899***************************.*********996 PP
2	Myb_DNA-binding	57.5	3.2e-18	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l a++++G++ W++Iar ++ gRt++ +k++w+ Oeu022767.1 74 RRAFTEEEEERLMAAHRLYGNK-WSLIARLFP-GRTDNAVKNHWHV 117 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MNMHAFSSGK DSNTGQSKLC ARGHWRPAED ARLKELVALY GPQNWNLIAE KLEGRSGKSC 60 RLRWFNQLDP RINRRAFTEE EEERLMAAHR LYGNKWSLIA RLFPGRTDNA VKNHWHVIMA 120 RKYREQSSAF RRRKMGQFVC KRSMEEDDIP LCNADAASKT KPTLPSYATF SDLTAACEFS 180 TRNGGDASGG GGATSSQMYG IPPPYSGFWA SQTSLGPITS EAMPICDQGK SWDDPKVESN 240 FLHSYPHYPS SLVTAMQQRN YHYPSDFTAS AHQVSVTEYT ASSSTMERNE SSEKFMLSTW 300 DDNKKVSKLI QYSTMQSISG LGCSMLATCH GPQGDDLRLS MTRECHGCGW GIRIMQAVCY 360 GWTEVPADQD RNCNRKTQTG KLSQIASIVA GNAGDATATQ VDCVGNHRLG RRDRNLVFSE 420 ANMPFDNLLE EAKFNLATLM ETCPFAHMSC RDSLAWKVTY QHRVGNEQDT MQQCNLQV*

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MNMHAFSSGK DSNTGQSKLC ARGHWRPAED ARLKELVALY GPQNWNLIAE KLEGRSGKSC  60
RLRWFNQLDP RINRRAFTEE EEERLMAAHR LYGNKWSLIA RLFPGRTDNA VKNHWHVIMA  120
RKYREQSSAF RRRKMGQFVC KRSMEEDDIP LCNADAASKT KPTLPSYATF SDLTAACEFS  180
TRNGGDASGG GGATSSQMYG IPPPYSGFWA SQTSLGPITS EAMPICDQGK SWDDPKVESN  240
FLHSYPHYPS SLVTAMQQRN YHYPSDFTAS AHQVSVTEYT ASSSTMERNE SSEKFMLSTW  300
DDNKKVSKLI QYSTMQSISG LGCSMLATCH GPQGDDLRLS MTRECHGCGW GIRIMQAVCY  360
GWTEVPADQD RNCNRKTQTG KLSQIASIVA GNAGDATATQ VDCVGNHRLG RRDRNLVFSE  420
ANMPFDNLLE EAKFNLATLM ETCPFAHMSC RDSLAWKVTY QHRVGNEQDT MQQCNLQV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	161	RRRKMGQFVCKRSMEEDDIPLCNADAASKTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-73	MYB family protein