PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022440.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 448aa MW: 49614.9 Da PI: 8.8445

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022440.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	56	76	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H Oeu022440.1 56 CEICGKGFQRDQNLQLHRRGH 76 *******************88 PP
2	zf-C2H2	13.6	0.0002	130	152	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ Oeu022440.1 130 WKCEKCSKRYAVQSDWKAHSKTC 152 58*****************9998 PP
3	zf-C2H2	10.9	0.0015	160	178	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr++++++H + Oeu022440.1 160 DCGTIFSRRDSFVTHRAYC 178 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MTDEVISTGS TKNQVSGSNP QPVVKKKRSL PGNPDPEAEV IALSPKTLMA TNRFLCEICG 60 KGFQRDQNLQ LHRRGHNLPW KLKQRSSKEV RKRVYICPEN GCVHNHPSRA LGDLTGIKKH 120 FCRKHGEKKW KCEKCSKRYA VQSDWKAHSK TCGTREYKCD CGTIFSRRDS FVTHRAYCDA 180 LAEETARIKA ASHMENHAGH TNYHFSLGPS MGQRFTSIFE PISCNPQKIN DPMTRSLTLW 240 NMSQQPSQNQ DILSKNFQEM HQMGISISSL GAVYSCTDPL VNPCASNPPA PTTTYQLNWD 300 FTKNLNSTKA SDDQLSCNSL PLSNINAKEL GGSAPSLFST QHQSHHQSST ANMSATALLQ 360 KAAEIGATTT DPSLLGNFGL KCTENPVQNA VTTRLGSDLS ALNQLQMYPS MRHHIQNQEN 420 ITEGETRDFL GVGIQSICHP SSINGWI*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MTDEVISTGS TKNQVSGSNP QPVVKKKRSL PGNPDPEAEV IALSPKTLMA TNRFLCEICG  60
KGFQRDQNLQ LHRRGHNLPW KLKQRSSKEV RKRVYICPEN GCVHNHPSRA LGDLTGIKKH  120
FCRKHGEKKW KCEKCSKRYA VQSDWKAHSK TCGTREYKCD CGTIFSRRDS FVTHRAYCDA  180
LAEETARIKA ASHMENHAGH TNYHFSLGPS MGQRFTSIFE PISCNPQKIN DPMTRSLTLW  240
NMSQQPSQNQ DILSKNFQEM HQMGISISSL GAVYSCTDPL VNPCASNPPA PTTTYQLNWD  300
FTKNLNSTKA SDDQLSCNSL PLSNINAKEL GGSAPSLFST QHQSHHQSST ANMSATALLQ  360
KAAEIGATTT DPSLLGNFGL KCTENPVQNA VTTRLGSDLS ALNQLQMYPS MRHHIQNQEN  420
ITEGETRDFL GVGIQSICHP SSINGWI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-141	C2H2 family protein