PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu022263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 182aa MW: 20367.3 Da PI: 6.8675 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 137.4 | 5.1e-43 | 28 | 127 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrr+C+++C+lapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g+i +lq+q+++l+++la+++ Oeu022263.1 28 PCAACKILRRRCVEKCILAPYFPPNDPLKFTTAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARLRDPVYGCTGTICQLQHQVNELQEQLAKTQ 125 7***********************************************************************************************99 PP DUF260 99 ee 100 +e Oeu022263.1 126 AE 127 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MECCDTKLKS HSLSSSPSPS RQSVVLSPCA ACKILRRRCV EKCILAPYFP PNDPLKFTTA 60 HRVFGASNII KFLQELPESQ RADAVSSMVY EANARLRDPV YGCTGTICQL QHQVNELQEQ 120 LAKTQAELGN MHCQQKNLMA LIWMEMAQSS PISSSQQSLD TIINFQDESN LGYLWEQPLW 180 T* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 2e-65 | LBD family protein |