PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022229.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 546aa MW: 59537.1 Da PI: 5.3228

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022229.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+++v+++G g+W+++ ++ g+ R++k+c++rw ++l Oeu022229.1 37 KGPWTSAEDAILIEYVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHL 84 79******************************************9986 PP
2	Myb_DNA-binding	47.1	5.3e-15	90	133	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ ++++++ ++G++ W++ a++++ gRt++++k++w++ Oeu022229.1 90 KGAFTPEEECRIIELHVKMGNK-WARMAAELP-GRTDNEIKNYWNT 133 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MSSESEEKMI AKNGVDLPYI EEGNSGGNVG GNGPLKKGPW TSAEDAILIE YVTKHGEGNW 60 NAVQKHSGLA RCGKSCRLRW ANHLRPDLKK GAFTPEEECR IIELHVKMGN KWARMAAELP 120 GRTDNEIKNY WNTRIKRRQR AGLPIYPPDV CMQALNENQH NENMDNFSSG DIRHSDFIPM 180 NVFEIPQFNG IEHNRQLYSP ALLDIPANGL LDIPASGLLV EGLDSSCPSR SLLSKMHLSK 240 HPSGPDSMFS GVSATSGGIL PDGSQYPDDG SMQIVQSFGF SSAYDHDSIS NHAFSSSLIP 300 GGHAITNGNP SSSEPAWAMK LELPSLQTQI GGWGSPYSPL PSLESVDTLI QSPPTEHTQS 360 CSFSPRNNGL LDAVLYESQT KKKSRNSCQP TLPASTMPVD VLDTSSHELH ETEWETCGDP 420 ISPFGHSSSS VFSEYTPMSG SSLDEPPSVE TMPGFKFKEP SADTENQMIF SRPDFLLASS 480 CSGLDKDPNK DYSFLKDTFG PFIGNGLGKD SKQIDTPTSS SAQERRHNSR AYNTMSTAWP 540 TSCNQ*

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MSSESEEKMI AKNGVDLPYI EEGNSGGNVG GNGPLKKGPW TSAEDAILIE YVTKHGEGNW  60
NAVQKHSGLA RCGKSCRLRW ANHLRPDLKK GAFTPEEECR IIELHVKMGN KWARMAAELP  120
GRTDNEIKNY WNTRIKRRQR AGLPIYPPDV CMQALNENQH NENMDNFSSG DIRHSDFIPM  180
NVFEIPQFNG IEHNRQLYSP ALLDIPANGL LDIPASGLLV EGLDSSCPSR SLLSKMHLSK  240
HPSGPDSMFS GVSATSGGIL PDGSQYPDDG SMQIVQSFGF SSAYDHDSIS NHAFSSSLIP  300
GGHAITNGNP SSSEPAWAMK LELPSLQTQI GGWGSPYSPL PSLESVDTLI QSPPTEHTQS  360
CSFSPRNNGL LDAVLYESQT KKKSRNSCQP TLPASTMPVD VLDTSSHELH ETEWETCGDP  420
ISPFGHSSSS VFSEYTPMSG SSLDEPPSVE TMPGFKFKEP SADTENQMIF SRPDFLLASS  480
CSGLDKDPNK DYSFLKDTFG PFIGNGLGKD SKQIDTPTSS SAQERRHNSR AYNTMSTAWP  540
TSCNQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	3e-86	MYB family protein