PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu022008.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 353aa MW: 40157 Da PI: 9.9631

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu022008.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	30	89	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a+ k++g Oeu022008.1 30 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAAIKYWG 89 78*****************988886678446***********************98 PP
2	AP2	46.8	7.1e-15	134	183	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Oeu022008.1 134 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 183 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MENRKRGHEK LKLKPKVHRK AIDSFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR 60 KGRQVYLGGY DMEEKAARAY DLAAIKYWGP TTHVNFPLEN YDNEVVQMEN MSRQEFVAHL 120 RRKSSGFSRG ISMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK 180 FRGVNAVTNF EISRYEVEKI MASDTLPARE LARRNKETDP ENKEFHPVER VGNVTNWKMV 240 QNASVESLGD KMMYNAGNYQ NLSFSGALQD LIGIESTNPY TQNFTSPSSL VTGSRETSPD 300 KTGGTVFFVK PNMANNYLNP STNANSWIPT SQLRPVPLAM SDLPVFPSWN DS*

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MENRKRGHEK LKLKPKVHRK AIDSFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQTR  60
KGRQVYLGGY DMEEKAARAY DLAAIKYWGP TTHVNFPLEN YDNEVVQMEN MSRQEFVAHL  120
RRKSSGFSRG ISMYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA AEAYDIAAIK  180
FRGVNAVTNF EISRYEVEKI MASDTLPARE LARRNKETDP ENKEFHPVER VGNVTNWKMV  240
QNASVESLGD KMMYNAGNYQ NLSFSGALQD LIGIESTNPY TQNFTSPSSL VTGSRETSPD  300
KTGGTVFFVK PNMANNYLNP STNANSWIPT SQLRPVPLAM SDLPVFPSWN DS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-121	AP2 family protein