PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu021583.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 356aa MW: 40379.2 Da PI: 6.9105 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+d++++ G g+W+t ++ g+ R++k+c++rw +yl Oeu021583.1 14 KGPWTPEEDHILIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.7e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ +lG++ W++Ia++++ gRt++++k++w+++ Oeu021583.1 67 RGRFSFEEEETIIQLHSMLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89********************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 356 aa Download sequence |
MGRAPCCDKS GLKKGPWTPE EDHILIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSMLGNKWS AIAARLPGRT DNEIKNYWNT HIRKKLLRMG 120 IDPVTHTPRL DLLHLSAILN SSSQMNFSRL VGMHNLVNPQ LLRLANLLSS TQFQNQNQYL 180 MLQNNAQDNQ ICSNSQLQNH MPPLVQPCQP QNQDIPTCTT LETPNVPISN IDQFRTSDVT 240 NFNPQNCQLN DWPNNQIDVT SFPEDYVPLS NYGYDCVYGS DPPPSDTSTF QSNGSSNFSF 300 RSVLSNMSSP SSSPTPLHSN SIKLTSNSTE EEKESYCSNL LKFNIQDMLD VNEFV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G21440.1 | 1e-106 | MYB family protein |