PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu021545.4
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 340aa    MW: 39171.3 Da    PI: 9.2914
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu021545.4genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.46e-312574150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+
  Oeu021545.4 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 74
                 79***********************************************8 PP
2K-box1095.3e-361892863100
        K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                  +s++ s++ea+a+ ++qe++kL++ i nLq+++R++lGe+L+ Lsl++L++Le+++e+++++iR+kKnell+++ie++qk+e +l+++n++Lr+k++e
  Oeu021545.4 189 SSNNGSVSEANAQFYEQEASKLRSHITNLQNQNRNMLGESLGALSLRDLKNLETKVERGISRIRTKKNELLFAEIEYMQKREIDLHHNNQYLRAKIAE 286
                  4445559****************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MALQSDHSRE ISHQRKISRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA  60
LVVFSSRGRL YEYANNSNGT EVKENGQPIR GTNRWGGAWW GKSDCRYKCT EAGNQWGVSE  120
CLISVLFFWL MHGNGCFKWT VLIFSEFLMD KTRFWHGFMP AWQGQPISSS TKLSVKATIE  180
RYKKTCSDSS NNGSVSEANA QFYEQEASKL RSHITNLQNQ NRNMLGESLG ALSLRDLKNL  240
ETKVERGISR IRTKKNELLF AEIEYMQKRE IDLHHNNQYL RAKIAETERA QQHMSLMPGS  300
SDYELVQPQP FDERNYLQVN ALQPNENYPQ QDQSPLQLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.12e-69MIKC_MADS family protein