PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu021464.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 363aa    MW: 40306.2 Da    PI: 8.419
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu021464.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.61.9e-07121141526
                  --SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                   C+ f++ G Ck Gd C +aHg
  Oeu021464.1 121 ACPEFRK-GACKKGDACEYAHG 141
                  7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MMIGVRNYDS QTEHVPPWSF ATDDSNSYIL SPNMNVNGGG GGSIDDYSIF TALQRYLPSN  60
SVGEGDLTVD AHTCDQFRMF EFKVRKCSRG KSHDWTECPY AHPGEKARRR DPRKFHYSGT  120
ACPEFRKGAC KKGDACEYAH GVFECWLHPA RYRTQPCKDG LNCKRRVCFF AHSADQLRVL  180
SPRAESYDGS PRRLAFISSP DSGSPPTESP PMSPMTPAAT TSMSSLNRSL GSNSINETIA  240
SLRQLQLNKV KSIPSSWNLQ VGCSPSGLGS PRVSVTRPGC LSLPSTPTKP LSRAGFRWDK  300
DVGYEEPPTE RIESGRDLRV QMFERLSKEN PLVRVNHLNW NLNPNPAQDP NPDIGWVSDM  360
LN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-114C3H family protein