PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu021016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 92aa MW: 10564.2 Da PI: 10.0259 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 103.5 | 1.9e-32 | 5 | 78 | 1 | 74 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvy 74 +CaaCk+lrr+C++dC+++ yfp+++p++fa+vhk+FGasn+ k+l++lp ++r da++sl+yeA++r++dP+ Oeu021016.1 5 RCAACKFLRRRCPSDCIFSLYFPSNNPQRFAYVHKIFGASNIGKMLQDLPVHRRADAADSLYYEAHCRIKDPIX 78 6***********************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MVSTRCAACK FLRRRCPSDC IFSLYFPSNN PQRFAYVHKI FGASNIGKML QDLPVHRRAD 60 AADSLYYEAH CRIKDPIXMK IYISRVKMQI A* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30130.1 | 1e-35 | LBD family protein |