PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020871.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 403aa MW: 44040.9 Da PI: 9.4003

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020871.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00076	167	189	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg +F+ ++L++H+ H Oeu020871.1 167 ACSECGDVFPKIESLEHHQAIrH 189 6******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MAVLSFPPEQ AAAVAKKQLS KRKKKHQKNN QTSSSSWNQI KNLLSCKQIQ DSKIHDPSKN 60 NTATFLSSSC SSICPFGDIV HGNTRVVHRA DNSPGQETML LSKKSSNWSS SSSRSISSSV 120 RSSGGGGTTY IAGSSRGMQF RKLSGCYECH SIVDPNRYPL PRTTICACSE CGDVFPKIES 180 LEHHQAIRHA VSEIGEEDSS RNIVEIIFTS SWLKKDNSVC NIERVLKVHN TQRTIQRFED 240 SRDAVKIRAN SNTKKNPRCA ADGNELLRFY CTTLICSLGT RGSTRLCGSF PGCGVCTIIR 300 HGFQGNKVSG VHTTASSGRA HDCLGSGDVR RAMLVCRVIA GRVKQVVNNA TFEEDRIGMS 360 PIRSYDSVAG CAGIYSNIEE LYVFNPRAIL PCFVVIYKAI ES*

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MAVLSFPPEQ AAAVAKKQLS KRKKKHQKNN QTSSSSWNQI KNLLSCKQIQ DSKIHDPSKN  60
NTATFLSSSC SSICPFGDIV HGNTRVVHRA DNSPGQETML LSKKSSNWSS SSSRSISSSV  120
RSSGGGGTTY IAGSSRGMQF RKLSGCYECH SIVDPNRYPL PRTTICACSE CGDVFPKIES  180
LEHHQAIRHA VSEIGEEDSS RNIVEIIFTS SWLKKDNSVC NIERVLKVHN TQRTIQRFED  240
SRDAVKIRAN SNTKKNPRCA ADGNELLRFY CTTLICSLGT RGSTRLCGSF PGCGVCTIIR  300
HGFQGNKVSG VHTTASSGRA HDCLGSGDVR RAMLVCRVIA GRVKQVVNNA TFEEDRIGMS  360
PIRSYDSVAG CAGIYSNIEE LYVFNPRAIL PCFVVIYKAI ES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-151	C2H2 family protein