PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020672.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 384aa MW: 41789.1 Da PI: 5.4577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020672.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl Oeu020672.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.5e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l Oeu020672.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120 IDPMTHKPKN DTLTSSDGQS KNSANLSHMA QWESARLEAE ARLARQSKLR SNSFTNPLNS 180 SEFSSSTSSQ MNKPVGLAQC LDILKAWNGG DGAMVGLGCE LESPTSTLSY SENAPPVSTT 240 GIGESSTTFV DFVGNSSGSS EAGIMKEEDE EDWKGFGNST VANSVSLTSG IHDISLPVEN 300 AWESESLRAN SEHVPSGNFV ERFTDLLLST AGGDRSLSGD GAEESFNCGG PSGSASDQYE 360 DDKNYWNSIL NLVNSSNSDS PTF*

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG  120
IDPMTHKPKN DTLTSSDGQS KNSANLSHMA QWESARLEAE ARLARQSKLR SNSFTNPLNS  180
SEFSSSTSSQ MNKPVGLAQC LDILKAWNGG DGAMVGLGCE LESPTSTLSY SENAPPVSTT  240
GIGESSTTFV DFVGNSSGSS EAGIMKEEDE EDWKGFGNST VANSVSLTSG IHDISLPVEN  300
AWESESLRAN SEHVPSGNFV ERFTDLLLST AGGDRSLSGD GAEESFNCGG PSGSASDQYE  360
DDKNYWNSIL NLVNSSNSDS PTF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-112	MYB family protein