PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu020595.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | SBP | ||||||||
Protein Properties | Length: 121aa MW: 12560.2 Da PI: 9.2986 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 60.3 | 4.8e-19 | 78 | 120 | 1 | 43 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfC 43 +CqvegCeadls a y++rhkvC +hsk+p+v+v+gleqrfC Oeu020595.1 78 RCQVEGCEADLSGAEAYYSRHKVCGTHSKSPKVIVAGLEQRFC 120 6****************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MELGSASTSS SSSTSGGSES LNGFKFGKKI YFEDVGVGVQ DKFGGRLPSL PPKAAELPPP 60 SPAKKRRSGV VQGGQPPRCQ VEGCEADLSG AEAYYSRHKV CGTHSKSPKV IVAGLEQRFC 120 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57920.1 | 1e-20 | SBP family protein |