PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu020348.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 512aa    MW: 57243.2 Da    PI: 5.4815
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu020348.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS241.43.8e-741305072374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfshlt 97 
                  ++lL  cA av++++ +++q++L  l++l+s +gd+++Rlaa+ ++AL+++l++  + +++a +  +t+  +s  +++ ++l  f+++ P++++ + +
  Oeu020348.1 130 EQLLNPCAAAVTAQNPSRVQHFLYVLQDLSSLTGDANHRLAAHGLQALKHHLSH--PCISSAPAG-STTFASSNPKFFRDSLikFNDINPWFRIPNNI 224
                  689**************************************************9..555555533.333333333333334456************** PP

         GRAS  98 aNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.........skeeleetgerLakfAeelgvpfefnvlv 182
                  aN  Il+ ++++   + +Hi+D+++s+G+QWp+Ll++L+ R+ ++pp +R+T+v+++  +         +        ++L  fA+ +++++++n l 
  Oeu020348.1 225 ANTSILQILAEQdcsSNLHIVDIGVSHGVQWPTLLEELTRRSgGPPPLVRLTVVAPSGDNnqsrstpfaNGPPNYDFYSQLLGFAKIININLQINRLE 322
                  *********999777889************************55666*******986554667788888777888999******************97 PP

         GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpr 277
                     l++l+ + ++ +++E+l+++ +++lh+l    +++++er+e+L+l++s++Pk vv++e++  +++ n ++F+++f++ +ey ++++ds+++ +  
  Oeu020348.1 323 NIPLQNLNSQVINSSTEEVLVICAQFRLHNLN---HNIPDERTEFLRLLRSMEPKGVVLSENNtdCSCnNCGDFATGFSRRVEYLWKFLDSTSVAY-- 415
                  77*****************************8...9999999*******************99445556778********************7774.. PP

         GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                    + r + Er++++ e+ +++++ g++    +e++ kW er++++GF+   ++e++ + a++llrk++ +++ r e ++ +++l Wk++p+ ++S W+
  Oeu020348.1 416 --KGRESDERRMMEAEAAKALTNVGEM----NERKDKWCERMRNSGFTLELFGEETIDGARALLRKYDsNWEIRTEGRDYCVCLWWKGQPVSFCSLWK 507
                  ..4555555555556688999999998....88899********************************99999999*********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MTLDEPEPNP AADHILEWLE GSLSYFPSFL DDPYDATDFS ADSWWVQTQC LDQEPISQSP  60
ASFNNSIATT ATTTINTKPM DSSVVSNQPM PPDLPKKRKL PDDLTASKKT TGKLAVNTNN  120
GNNKEGRWAE QLLNPCAAAV TAQNPSRVQH FLYVLQDLSS LTGDANHRLA AHGLQALKHH  180
LSHPCISSAP AGSTTFASSN PKFFRDSLIK FNDINPWFRI PNNIANTSIL QILAEQDCSS  240
NLHIVDIGVS HGVQWPTLLE ELTRRSGGPP PLVRLTVVAP SGDNNQSRST PFANGPPNYD  300
FYSQLLGFAK IININLQINR LENIPLQNLN SQVINSSTEE VLVICAQFRL HNLNHNIPDE  360
RTEFLRLLRS MEPKGVVLSE NNTDCSCNNC GDFATGFSRR VEYLWKFLDS TSVAYKGRES  420
DERRMMEAEA AKALTNVGEM NERKDKWCER MRNSGFTLEL FGEETIDGAR ALLRKYDSNW  480
EIRTEGRDYC VCLWWKGQPV SFCSLWKPCD S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-150GRAS family protein