PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu020322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 26982.5 Da PI: 5.984 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.2 | 9.3e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G +W+++++ g++R++k+c++rw +yl Oeu020322.1 14 RGPWTIEEDHKLMNFILNNGIQCWRLVPKLAGLRRCGKSCRLRWINYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.7 | 4.1e-16 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+ E++ +++++ +lG++ W++Ia++++ gRt++++k++w++ Oeu020322.1 67 RGALTEAEEDMIIELHSRLGNR-WSKIASHFP-GRTDNEIKNYWNT 110 7889******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGRQPCCEKE GLKRGPWTIE EDHKLMNFIL NNGIQCWRLV PKLAGLRRCG KSCRLRWINY 60 LRPDLKRGAL TEAEEDMIIE LHSRLGNRWS KIASHFPGRT DNEIKNYWNT RIKKKLRLLG 120 LDPVTHKPVD ETENSAAENE EIYQHIISKE KETDYQTEGA AKSGFNEMKN ISIFDVPKEN 180 SEMGSILSKT TDESSVNFSA IIDGHDQFED PFQNWIASPL QWDVFSNLEE NFP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 117 | RIKKKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14340.1 | 2e-82 | MYB family protein |