PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020280.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 1106aa MW: 123803 Da PI: 7.2939

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020280.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.1	1.6e-40	144	221	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvC+vhsk++++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Oeu020280.2 144 VCQVEDCRADLSNAKNYHRRHKVCDVHSKTTKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 221 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1106 aa Download sequence
METKRGGKTN LVYGPAVSDL KAVGKKKMEW DLNDWKWDGD LCTATPLNSV ADCRSEHLFP 60 VEANNDALDG DEMPLGNERG TELEKRRRVI DVENEEVNDG SGSPHLNLGG QVYPITRGDV 120 DVDKWEGKSK KKSKIAGALT NGAVCQVEDC RADLSNAKNY HRRHKVCDVH SKTTKALVGN 180 VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKTH PENVANGASV NDERGSNYLL 240 VSLLRILSNI QFKVQDQASC FPESITMLRK SHSASQWLVK SNDFPVEKHN EINFKIDQNG 300 VHYITVDKMK ECRKGLSTKR CWQVDNLIMV LVYIEFKILP NNEIPGMYGA ITLLSRPVNS 360 DQTKDQDLLP HLLRNLASLA GPINERDASG LPPRFEDTKN TGISIKTSEK DPPLPVEQRM 420 KISASGVREN RMLTNNAQDG DVQKESAFLF PWKERNSSIA NASDAMVGRA KPITFDLNNV 480 YDDSQDHVEN LLDPVAPQNI GNVSSDGPLC LHTDPHTSTA PQNSGNSCSI STQSPSNSSG 540 EAQSRTDRIV FKLFGKNPSE IPPALRKQIL DWLSHSPGDI ESYIRPGCII LTIYLRIDKS 600 TWEELHCDLS SSLRRLIDSS TDSFWRTGWI YARVRQHVAF IYNGQVVLDT LLPLKNHRSC 660 RISSIKPIAV PVSEKVQFLV RGFNLSLFTA RLLCALEGKY LVQESCAKVT GEADPLIEHD 720 EMQSLSFPCT VPSFMGRGFI EVEDHGLSSS FFPFIVAEKD VCSEICTLER IIEASEVSGG 780 IGGDTDKLEA RNQALEFIHE MGWLLHKIHL KFRLGETNAN VDPFSFRRFR WLVEFSVDHN 840 WCAVVRKLLD ILYGGNVDAG QHTSVALALM DIGLLHRAVR TNCRSMVELL LRYHQDEFLN 900 KSGCEHKQHD EDSYIFKPDA VGPGGLTPLH IAASLDGCEN VLDALTEDPG LVGIEVWKGA 960 RDSTGLTPYD YACFRGHFSY INLVQRKINK IAENRHIVDI PGTLLDGIIK HKVPNDAEKS 1020 AKSSATFESE KGVGRANERH CQQCEQKLRC GRSSRLSLAI YRPAMLFMVA IAAVCVCVAL 1080 LFKSSPEVIY VFQPFRWEQL KYGSS*

Sequence ? help Back to Top

Protein Sequence Length: 1106 aa Download sequence

METKRGGKTN LVYGPAVSDL KAVGKKKMEW DLNDWKWDGD LCTATPLNSV ADCRSEHLFP  60
VEANNDALDG DEMPLGNERG TELEKRRRVI DVENEEVNDG SGSPHLNLGG QVYPITRGDV  120
DVDKWEGKSK KKSKIAGALT NGAVCQVEDC RADLSNAKNY HRRHKVCDVH SKTTKALVGN  180
VMQRFCQQCS RFHVLQEFDE GKRSCRRRLA GHNKRRRKTH PENVANGASV NDERGSNYLL  240
VSLLRILSNI QFKVQDQASC FPESITMLRK SHSASQWLVK SNDFPVEKHN EINFKIDQNG  300
VHYITVDKMK ECRKGLSTKR CWQVDNLIMV LVYIEFKILP NNEIPGMYGA ITLLSRPVNS  360
DQTKDQDLLP HLLRNLASLA GPINERDASG LPPRFEDTKN TGISIKTSEK DPPLPVEQRM  420
KISASGVREN RMLTNNAQDG DVQKESAFLF PWKERNSSIA NASDAMVGRA KPITFDLNNV  480
YDDSQDHVEN LLDPVAPQNI GNVSSDGPLC LHTDPHTSTA PQNSGNSCSI STQSPSNSSG  540
EAQSRTDRIV FKLFGKNPSE IPPALRKQIL DWLSHSPGDI ESYIRPGCII LTIYLRIDKS  600
TWEELHCDLS SSLRRLIDSS TDSFWRTGWI YARVRQHVAF IYNGQVVLDT LLPLKNHRSC  660
RISSIKPIAV PVSEKVQFLV RGFNLSLFTA RLLCALEGKY LVQESCAKVT GEADPLIEHD  720
EMQSLSFPCT VPSFMGRGFI EVEDHGLSSS FFPFIVAEKD VCSEICTLER IIEASEVSGG  780
IGGDTDKLEA RNQALEFIHE MGWLLHKIHL KFRLGETNAN VDPFSFRRFR WLVEFSVDHN  840
WCAVVRKLLD ILYGGNVDAG QHTSVALALM DIGLLHRAVR TNCRSMVELL LRYHQDEFLN  900
KSGCEHKQHD EDSYIFKPDA VGPGGLTPLH IAASLDGCEN VLDALTEDPG LVGIEVWKGA  960
RDSTGLTPYD YACFRGHFSY INLVQRKINK IAENRHIVDI PGTLLDGIIK HKVPNDAEKS  1020
AKSSATFESE KGVGRANERH CQQCEQKLRC GRSSRLSLAI YRPAMLFMVA IAAVCVCVAL  1080
LFKSSPEVIY VFQPFRWEQL KYGSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	89	KRRRV
2	214	220	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	1e-180	SBP family protein