PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu019709.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 330aa    MW: 37620.4 Da    PI: 4.9349
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu019709.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.93.7e-161663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++ Ed++l   ++++G ++W++ +++ g+ R++k+c++rw +yl
      Oeu019709.1 16 KGPWSPAEDLRLMSFIQKHGHNNWRSLPKEAGLSRCGKSCRLRWINYL 63
                     79********************************************97 PP
2Myb_DNA-binding52.21.4e-1669114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E+e ++++++ +G++ W++Ia++++ gRt++++k+ w+++l
      Oeu019709.1  69 RGNFTSDEEETIIRLHNSFGNK-WSKIASHLP-GRTDNEIKNVWNTHL 114
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGRGRAPCCD KTKVKKGPWS PAEDLRLMSF IQKHGHNNWR SLPKEAGLSR CGKSCRLRWI  60
NYLRPDVKRG NFTSDEEETI IRLHNSFGNK WSKIASHLPG RTDNEIKNVW NTHLKKRLTR  120
KTEASGSPMD YSDSPSSPSS SVTSNEDHIM ETTDQTVQEP DAKKPNEKTE ILKVISKHPS  180
DEPKETASYD SPTSSYASNF CNVSGDIVTR PEERKESTTS DEEIEIPLEW DIDFWNLLDT  240
LDPYQTTNSE QNKYENSNAA EKVDNEDVCK EWLRYLENEL GLTGGNGSDN LPNTEHTRSL  300
HQEINFEPEI EPEMDYFPIW PPSPQNFGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.15e-77MYB family protein