PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018997.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 170aa MW: 19701.6 Da PI: 9.6116

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018997.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.9	4.1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaev +iifss+gklye++s Oeu018997.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVGLIIFSSSGKLYEFCS 59 79***********************************************96 PP
2	K-box	67.2	5.6e-23	89	153	7	71
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 +s ++ +++s++qe+ Lk ++e+Lq++qR +lGedL++L k+L+qLe qL++slk+iRs+K Oeu018997.1 89 QSSSDGQQQSMYQEYLELKVRVEMLQKSQRYFLGEDLGQLGTKDLEQLECQLDTSLKQIRSTKVP 153 33678899******************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVGLIIFSS SGKLYEFCSS 60 SRHVPFPSLM SKTIERYQRC SYEAYKMNQS SSDGQQQSMY QEYLELKVRV EMLQKSQRYF 120 LGEDLGQLGT KDLEQLECQL DTSLKQIRST KVPYTYININ SHIHTQKHI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03710.3	1e-65	MIKC_MADS family protein