PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018956.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 287aa    MW: 32098.8 Da    PI: 5.2662
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018956.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind118.34.4e-37101012102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++ +++isw+e+g++fvv+++ efak++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+++kell +i+
   Oeu018956.1  10 FLTKTYDLVDDPSSDDVISWNESGTAFVVWKTAEFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANENFKRDQKELLIEIR 97 
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
   Oeu018956.1  98 RRKT 101
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSQRSVPAPF LTKTYDLVDD PSSDDVISWN ESGTAFVVWK TAEFAKDLLP NYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANENFKRDQK ELLIEIRRRK TVPSQNPSGL KHVVTDSPTL  120
QENSGDDLGS SSTSSPDSKN PGSLGTQTSA QLADLSDENK KLKKDNHMLC SELAQTKKQC  180
DELIAYLTQC VKVAPEQINQ IMNGSAPIVD EARPCNKGVG DENLGNDNDE NVDCVKLFGV  240
MVKKRSRDLN IDFSEVHKKE MKTTAEDSES WMKVSVSSQE NSKVYS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.13e-77HSF family protein