PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018818.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HB-PHD
Protein Properties Length: 703aa    MW: 79424 Da    PI: 9.7025
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018818.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.33.6e-104865281153
                  HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
     Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                   +e L  +F+kn  p+++ re L+k+lg++ ++V  WF+N R+
  Oeu018818.1 486 AVEKLRLVFAKNELPDRAVRENLSKQLGIEFDKVNKWFKNARY 528
                  5788999**********************************97 PP
2PHD43.95.6e-15215269150
                  SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHT CS
          PHD   1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCke 50 
                  +C+ C+   +  +++++lCd +C+++fH+kCl+++l++e++p g  +w+C+ Ck+
  Oeu018818.1 215 ICAKCKMreALPDNDIILCDgTCNRAFHQKCLDPPLSTENIPPGdeSWFCKFCKS 269
                  599999954445********56********************9999*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    
MPGEAKEQSH KKKFLVEDEA KNLQNKKPKV KQRNRTHSSL PKKNVTNRLS VSNGSPSWKK  60
VVNKAAVHKT KTCKKQPLLS GVNDEVQVIS TKDSEKQDDG DIKLQNLKRR RKRKKRKDNV  120
ELDEASRLQR RTRYLLIKLK LEQNLIDAYS AEGWKGQSRE KIKPEKELQR AKKQILKCKL  180
GIREAIRQLD LLSSVGRIDD SAVAPDGSVH HEHIICAKCK MREALPDNDI ILCDGTCNRA  240
FHQKCLDPPL STENIPPGDE SWFCKFCKSK MDILEATNAH LGTHFPMDSN WQDVFKEEAL  300
LPDGGDSMLC PEQEWPSDDS EDDDYDPERI EPSCSDSMAS SESDGSEYSS SFLGSLEDEP  360
LSLSGRNEER RKECQDIYSE LIGVDSDENN DGEAVCGRRQ RSTVDYLKLH DEMFGKTAAE  420
DEQISEDEDW GPTKRKRKGN ETDAGGTLVA QSETEKNCSK EKPKEVKEKL SSGKIKRPIF  480
RIPLNAVEKL RLVFAKNELP DRAVRENLSK QLGIEFDKVN KWFKNARYLA LKARKARRNA  540
KSSDDGSAGT RDQSTSEIET TKHADQMASK DSTLLQAPKS SKKAHRGKKP CLPTNPLKGK  600
QRRKTMLQKP VNKKVAADFG DDVSLKLLRE KAKEAKKSNR KRSRMLAAEA ELKRLCEVES  660
KVKNLQQALR GLPNHGRSKV DGSTSTEQSI VYVPVAEVRE KR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108114KRRRKRK
2108116KRRRKRKKR
3109115KRRRKRK
4109117KRRRKRKKR
5109118RRRKRKKRKD
6110116KRRRKRK
7110140RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
8110119RRRKRKKRKD
9111117KRRRKRK
10111115RKRKK
11111141RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
12111120RRRKRKKRKD
13112142RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
14113118RKKRKD
15113143RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
16114144RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
17434464RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
18435465RRKRKKRKDNVELDEASRLQRRTRYLLIKLK
19588604KKPCLPTNPLKGKQRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.21e-101HB-PHD family protein