PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018677.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 371aa MW: 42797.2 Da PI: 8.6644

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018677.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.5	3.9e-14	55	114	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ ++++gr++++++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g Oeu018677.1 55 SRFRGVSKHRWTGRYESHLWDkLSWNVtrkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 114 789****************888844444446***********************98 PP
2	AP2	49.3	1.2e-15	150	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g + + +lg++ t eeAa+a++ a+ +++g Oeu018677.1 150 SKYRGVARHHHNGRWEARIGRvF---G-NHYLYLGTYSTQEEAARAYDIAAIEYRG 201 89**99******99966...3.5***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MAMTMLMSEE NLGKRFMCME DGEMPEVRRR VKRRKRDTEI VADLKSAPTT VKRSSRFRGV 60 SKHRWTGRYE SHLWDKLSWN VTRKKKGKQV YLGAYDDEEA AARAYDLAAL KYWGRSTFTN 120 FPISDYVEEI EIMQTVTKEE RSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNHYLYLG 180 TYSTQEEAAR AYDIAAIEYR GINAITNFDL NTYIRWLKPE ANTSIPAQEQ KPNPMTHKKM 240 QPSMLQTRGF IADNLIKQER FEQNIPVNTC RKSSSPTAVN LLLRSSMFRE MVQKNSNFMK 300 DEIIDGEDTK NLPQLGGDDE YGGSFCDGPQ DHIPLVLSSD DYSIDLEREL NFNFDYDFPS 360 MSWSNMASLG *

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MAMTMLMSEE NLGKRFMCME DGEMPEVRRR VKRRKRDTEI VADLKSAPTT VKRSSRFRGV  60
SKHRWTGRYE SHLWDKLSWN VTRKKKGKQV YLGAYDDEEA AARAYDLAAL KYWGRSTFTN  120
FPISDYVEEI EIMQTVTKEE RSSGFSRGVS KYRGVARHHH NGRWEARIGR VFGNHYLYLG  180
TYSTQEEAAR AYDIAAIEYR GINAITNFDL NTYIRWLKPE ANTSIPAQEQ KPNPMTHKKM  240
QPSMLQTRGF IADNLIKQER FEQNIPVNTC RKSSSPTAVN LLLRSSMFRE MVQKNSNFMK  300
DEIIDGEDTK NLPQLGGDDE YGGSFCDGPQ DHIPLVLSSD DYSIDLEREL NFNFDYDFPS  360
MSWSNMASLG *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	37	RRVKRRKRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-71	AP2 family protein