PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018542.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NF-YC

Protein Properties

Length: 195aa MW: 21406.9 Da PI: 4.4743

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018542.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	44.1	4.6e-14	36	73	1	35
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkaded 35 ql++fw++q ie+a+df+nh+lPlarikki+kaded Oeu018542.1 36 QLQMFWTYQrreIEQANDFRNHQLPLARIKKIMKADED 73 89***999999*********************98 PP
2	NF-YC	39.8	9.6e-13	72	105	69	102
NF-YC 69 nkrrtlkksdiaaavtrtdifdflvdivprdelk 102 +rrtl+k+diaaa+trtdifdflvdivprde+k Oeu018542.1 72 EDRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 105 579****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MENNPHQTAA PASASQQAVY PSQPPYPQLL QQQQQQLQMF WTYQRREIEQ ANDFRNHQLP 60 LARIKKIMKA DEDRRTLQKN DIAAAITRTD IFDFLVDIVP RDEIKEEAAS LGAILGPPVV 120 ASGATGVPYY YPPMGQPMMG QPAMPGMDPG MYLQAPSPPT SQAWQSVWQT APDDGSYASC 180 GGTSSNQANL DGQE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	80	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	5e-48	NF-YC family protein