PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018479.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 329aa MW: 36899.5 Da PI: 6.7512

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018479.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++ ++++G+g +W + ++++g++R++k+c++rw++yl Oeu018479.1 14 KGPWSPEEDAKLKEFIEKYGTGgNWIALPQKVGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.1	3.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ + + G++ W+ Ia+ ++ gRt++++k++w++ Oeu018479.1 69 GEFSDEEDRIICTLYASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEFIE KYGTGGNWIA LPQKVGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC TLYASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGM 120 IQPNQGSNPS FSATLHTPLP QSQALPSLSQ LYKDFSSLYT PMDRSITGLE SISSIPQNFL 180 YGNNSNIPLT TNYQYSCYEQ NQERLMDLKS YAVKENMLIF GGAEASSSSD GSCSQTSHGK 240 VVKQEEMGFV QGLMSTNRFE EYQKFILDYG NINGDNNGGP FLDQKPNGIL GNSELQYDIE 300 EVKQLISTGN GLLNDENKTQ ETGMYQYY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-80	MYB family protein