PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017915.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C3H

Protein Properties

Length: 1912aa MW: 211586 Da PI: 9.0092

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017915.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	32.7	1.2e-10	159	183	2	26
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 +++ C f+++t CkyG++CkF H+ Oeu017915.1 159 GEKDCAFYMQTRMCKYGESCKFDHP 183 7889********************8 PP
2	zf-CCCH	31	4.3e-10	209	235	1	27
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C++f++t Ck+G rCkF+H++ Oeu017915.1 209 PGEPDCPHFLKTQRCKFGIRCKFNHPK 235 5789*********************96 PP
3	zf-CCCH	35.4	1.9e-11	260	282	5	27
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 +C f+++tG Ck+G++CkF+H++ Oeu017915.1 260 PCAFYMKTGKCKFGATCKFHHPK 282 8********************96 PP
4	zf-CCCH	34.8	2.7e-11	327	352	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 ++++ C+f+++tG CkyG +C+++H+ Oeu017915.1 327 PGEVDCPFYLKTGSCKYGTTCRYNHP 352 57899********************9 PP
5	zf-CCCH	38.7	1.7e-12	409	434	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +++++C+++++tG Ck+G++C+F+H+ Oeu017915.1 409 PGQPECDYYMKTGVCKFGENCRFHHP 434 5789*********************8 PP
6	zf-CCCH	34.6	3.3e-11	468	489	6	27
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 C+++++tGtCkyG++C+F H+p Oeu017915.1 468 CPYYMKTGTCKYGATCRFDHPP 489 ********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1912 aa Download sequence
MANKLYGYNP SNYSGGGAAA SSLYGSRSVT EPYIPGATSF LGTASKYLNS DSLSSSSALS 60 SALLYNSDSH SSRIPGISVA TPTHSYGPPG VDVGSAVVST DTLYSGLKRP SAETLYHQTV 120 LGAHSTFGQT EAWYSANPLA KRPRYENTSN LPIYPQRPGE KDCAFYMQTR MCKYGESCKF 180 DHPIWVPEGG IPDWKEVPPV PSESLPERPG EPDCPHFLKT QRCKFGIRCK FNHPKDKIVP 240 LGAPDNADVS TLPERPSELP CAFYMKTGKC KFGATCKFHH PKGVEVPSAG EESATGLQNE 300 MFGDSKPVQS LYTPALLHNT KGLPIRPGEV DCPFYLKTGS CKYGTTCRYN HPDRHAMNPL 360 TAAIAPVLAS PAHFSFGAVT PAASLLPTFD PRLTQTSLGL TPSIYPQRPG QPECDYYMKT 420 GVCKFGENCR FHHPIDRSAP TASVKESVQQ NVKLTLAGLP RREGAIHCPY YMKTGTCKYG 480 ATCRFDHPPP GEVMAMATSQ GASASAGEEA ILGVKWDDRL AQPKFGLAAR TTKGNPFNRH 540 WLSWLGSSYQ GLARLMSCKI LLIMASLLAH KLASKLTHSA HTLMWDGHIV GGVEAQRYGL 600 NSSPAFRITA AVIVCCGDGD GLFVGFGGDG GWVRFKWREE MMVVVVFCGW CGGGVLWWWQ 660 RAAIKVEVLK QVQKTGLYKH VMDILSSKKS SCQIKQTVGV RDSSPHIASS VCCQGAGFFT 720 GKLGLADRSL PKKKGTTSVV GMVFRRLPET IGIVAGGRLG LSEQLPELSS EKSPEMGWDR 780 RRNGVGRRDK ENAFVSNSSF DAAQPPPPDS KPNQVPDVQT LVKRFWKVAA PYWFSDDKTQ 840 ARWRLATVFA LTLGTTGISV TFNFLGRDFY NALADKDQAR FTTQLLYYLV GFAGGIPVST 900 LLRFLSIFPV VFVLRDYAKD TLSLRWRSWM TSYYMDRYLK NRTFYKIQSQ SIIDNPDQRI 960 VDDLSSFTGT ALAFSLTLFN ATVDLISFSN ILYGIYPPLF IVLLAYSLGG TAISVFLGRG 1020 LVTLNFLQEK KEADFRYGLV RVRENAESIA FYGGEENEMQ LLLQRFRSAF ENLSKLLISS 1080 RNLEFFTSGY RYLIQILPAA VVAPMYFSGK IEFGVINQSV SAFNHILGDF SLIVYQFQAI 1140 SAFSAVIDRL GEFDDVLSSD TRNDGESMEE IEREYCSTNS FSALNSNGSM PLAVSVKLLS 1200 IEHLTLLTPS KATLIKDLSL EICEKENLLV TGPSGSGKTS LLRAIAGLWN FGRGTITFYN 1260 KNARSPKPCV STGMDSGEVT SVSETNPDHN RHRERNSSVL FLPQKPYMVL GNLRQQLLYP 1320 TWSEDPTSVS DSNKPTVCCG DGDGLFVGFG GDGGWVRFKW REEMMVVVVF CGWCGGGMLW 1380 WWQRAAIKVE VLKQVQKTGL YKHVMDILSS KKSSCQIKQT VGVRDSSPHI ASSVCCQGAG 1440 FFTGKLGLAD RRLSETIGIV AGGRLGLSEQ LPELSSEMGW DHRRNGVGRR DKENAFVSNS 1500 SFDAAQPPPP DSKPNQVPDV QTLVKRFWKV AAPYWFSDDK TQARWRLATV FALTLGTTGI 1560 SVTFNFLGRD FYNALADKDQ ARFTTQLLYY LVGFAGGIPV STLLRFLSIF PVVFVLRDYA 1620 KDTLSLRWRS WMTSYYMDRY LKNRTFYKIQ SQSIIDNPDQ RIVDDLSSFT GTALAFSLTL 1680 FNATVDLISF SNILYGIYPP LFIVLLAYSL GGTAISVFLG RGLVTLNFLQ EKKEADFRYG 1740 LVRVRENAES IAFYGGEENE MQLLLQRFRS AFENLSKLLI SSRNLEFFTS GYRYLIQILP 1800 AAVVAPMYFS GKIEFGVINQ SVSAFNHILG DFSLIVYQFQ AISAFSAVID RLVIRIDNAP 1860 RFFSIPSPPP AANNLRIPLS PHVLIHQINT LIFANHYNRL YVSFHLGKGP E*

Sequence ? help Back to Top

Protein Sequence Length: 1912 aa Download sequence

MANKLYGYNP SNYSGGGAAA SSLYGSRSVT EPYIPGATSF LGTASKYLNS DSLSSSSALS  60
SALLYNSDSH SSRIPGISVA TPTHSYGPPG VDVGSAVVST DTLYSGLKRP SAETLYHQTV  120
LGAHSTFGQT EAWYSANPLA KRPRYENTSN LPIYPQRPGE KDCAFYMQTR MCKYGESCKF  180
DHPIWVPEGG IPDWKEVPPV PSESLPERPG EPDCPHFLKT QRCKFGIRCK FNHPKDKIVP  240
LGAPDNADVS TLPERPSELP CAFYMKTGKC KFGATCKFHH PKGVEVPSAG EESATGLQNE  300
MFGDSKPVQS LYTPALLHNT KGLPIRPGEV DCPFYLKTGS CKYGTTCRYN HPDRHAMNPL  360
TAAIAPVLAS PAHFSFGAVT PAASLLPTFD PRLTQTSLGL TPSIYPQRPG QPECDYYMKT  420
GVCKFGENCR FHHPIDRSAP TASVKESVQQ NVKLTLAGLP RREGAIHCPY YMKTGTCKYG  480
ATCRFDHPPP GEVMAMATSQ GASASAGEEA ILGVKWDDRL AQPKFGLAAR TTKGNPFNRH  540
WLSWLGSSYQ GLARLMSCKI LLIMASLLAH KLASKLTHSA HTLMWDGHIV GGVEAQRYGL  600
NSSPAFRITA AVIVCCGDGD GLFVGFGGDG GWVRFKWREE MMVVVVFCGW CGGGVLWWWQ  660
RAAIKVEVLK QVQKTGLYKH VMDILSSKKS SCQIKQTVGV RDSSPHIASS VCCQGAGFFT  720
GKLGLADRSL PKKKGTTSVV GMVFRRLPET IGIVAGGRLG LSEQLPELSS EKSPEMGWDR  780
RRNGVGRRDK ENAFVSNSSF DAAQPPPPDS KPNQVPDVQT LVKRFWKVAA PYWFSDDKTQ  840
ARWRLATVFA LTLGTTGISV TFNFLGRDFY NALADKDQAR FTTQLLYYLV GFAGGIPVST  900
LLRFLSIFPV VFVLRDYAKD TLSLRWRSWM TSYYMDRYLK NRTFYKIQSQ SIIDNPDQRI  960
VDDLSSFTGT ALAFSLTLFN ATVDLISFSN ILYGIYPPLF IVLLAYSLGG TAISVFLGRG  1020
LVTLNFLQEK KEADFRYGLV RVRENAESIA FYGGEENEMQ LLLQRFRSAF ENLSKLLISS  1080
RNLEFFTSGY RYLIQILPAA VVAPMYFSGK IEFGVINQSV SAFNHILGDF SLIVYQFQAI  1140
SAFSAVIDRL GEFDDVLSSD TRNDGESMEE IEREYCSTNS FSALNSNGSM PLAVSVKLLS  1200
IEHLTLLTPS KATLIKDLSL EICEKENLLV TGPSGSGKTS LLRAIAGLWN FGRGTITFYN  1260
KNARSPKPCV STGMDSGEVT SVSETNPDHN RHRERNSSVL FLPQKPYMVL GNLRQQLLYP  1320
TWSEDPTSVS DSNKPTVCCG DGDGLFVGFG GDGGWVRFKW REEMMVVVVF CGWCGGGMLW  1380
WWQRAAIKVE VLKQVQKTGL YKHVMDILSS KKSSCQIKQT VGVRDSSPHI ASSVCCQGAG  1440
FFTGKLGLAD RRLSETIGIV AGGRLGLSEQ LPELSSEMGW DHRRNGVGRR DKENAFVSNS  1500
SFDAAQPPPP DSKPNQVPDV QTLVKRFWKV AAPYWFSDDK TQARWRLATV FALTLGTTGI  1560
SVTFNFLGRD FYNALADKDQ ARFTTQLLYY LVGFAGGIPV STLLRFLSIF PVVFVLRDYA  1620
KDTLSLRWRS WMTSYYMDRY LKNRTFYKIQ SQSIIDNPDQ RIVDDLSSFT GTALAFSLTL  1680
FNATVDLISF SNILYGIYPP LFIVLLAYSL GGTAISVFLG RGLVTLNFLQ EKKEADFRYG  1740
LVRVRENAES IAFYGGEENE MQLLLQRFRS AFENLSKLLI SSRNLEFFTS GYRYLIQILP  1800
AAVVAPMYFS GKIEFGVINQ SVSAFNHILG DFSLIVYQFQ AISAFSAVID RLVIRIDNAP  1860
RFFSIPSPPP AANNLRIPLS PHVLIHQINT LIFANHYNRL YVSFHLGKGP E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12680.1	1e-166	C3H family protein