PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu017586.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 218aa    MW: 24306 Da    PI: 9.7541
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu017586.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.65e-211762449
                 -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 + +sn  vtfskRr g++KKA+ELS+LC+ae+a+i+fs+  k++ +
  Oeu017586.1 17 SKESNLLVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62
                 6788999********************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MTRKSRGRQK IEMAKMSKES NLLVTFSKRR SGLFKKASEL STLCGAEIAI IVFSPGKKVF  60
SFGHPCVESI VDRYMMRNST PSSSMMQLME AHRNASVQEL NMQLTNILSQ LESEKKCSEE  120
LTRIRKASQG TCWWEAPFNE LRLEELEQLK GAMEELKKNV ANQVERLIVE ASNSLQPVLG  180
ASSSRGNVGV DVDVKIPGLG FSMTPHGYSF GYGRPFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.19e-68M-type_MADS family protein