PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017195.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 614aa MW: 68987.1 Da PI: 8.979

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017195.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.5	6e-24	109	210	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++ +++a+e+ + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F + +++el Oeu017195.1 109 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGEL 203 99***************************7333.34459*********************************************..449999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+v+r+ Oeu017195.1 204 RVGVRRA 210 ****996 PP
2	Auxin_resp	119.2	3.3e-39	235	317	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a ha++tk++F+v+Y+Pr+s+seF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg +d+d+ rWp+SkWr+Lk Oeu017195.1 235 ALHAIQTKTIFTVYYKPRTSPSEFIVPYDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGNEDSDSRRWPQSKWRCLK 317 689******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MALYTELWKA CAGPLVTVPR ANELVFYFPQ GHIEQVEAST NQSADQQMPV YNLPSKILCR 60 VVNVLLKAEP DTDEVFAHVI LMPEPNQDEN AVKKEPLPPP PPRFHVHSFC KTLTASDTST 120 HGGFSVLRRH ADECLPPLDM SRQPPTQELV AKDLHGNEWR FRHIFRGQPR RHLLQSGWSV 180 FVSSKRLVAG DAFIFLRGEN GELRVGVRRA MRQQGNAPSS VISSHSMHLG VLATALHAIQ 240 TKTIFTVYYK PRTSPSEFIV PYDQYMESVK NNYSIGMRFK MRFEGEEAPE QRFTGTIVGN 300 EDSDSRRWPQ SKWRCLKVRW DETSTISRPE RVSPWEIEPS ISPSALNPLP GPRPKRTRSN 360 ALPVSPDSSV LIREGSSKMT VDPPSANGFP RVLQGQELLT LKGAFAESNE SDSSEKPMLW 420 PPSLDDEKIE LVPSSRRYGS DKWPPLGRRE SSFTDLLTGF GSQNKLSHEF CDNEVSKRQI 480 QEREGKFSLI GNAWSMMPSG LSLNLMDAGK KTHGQGPNAS YHTRGDIRYS GGFRDSMLPD 540 HRDGNQHVNR LMPPPNSPCL QMPPGHSREL QPNSVFAQDD NKKPKEALLQ GGDSGTCYFI 600 PTDGKKKKKW LTW*

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MALYTELWKA CAGPLVTVPR ANELVFYFPQ GHIEQVEAST NQSADQQMPV YNLPSKILCR  60
VVNVLLKAEP DTDEVFAHVI LMPEPNQDEN AVKKEPLPPP PPRFHVHSFC KTLTASDTST  120
HGGFSVLRRH ADECLPPLDM SRQPPTQELV AKDLHGNEWR FRHIFRGQPR RHLLQSGWSV  180
FVSSKRLVAG DAFIFLRGEN GELRVGVRRA MRQQGNAPSS VISSHSMHLG VLATALHAIQ  240
TKTIFTVYYK PRTSPSEFIV PYDQYMESVK NNYSIGMRFK MRFEGEEAPE QRFTGTIVGN  300
EDSDSRRWPQ SKWRCLKVRW DETSTISRPE RVSPWEIEPS ISPSALNPLP GPRPKRTRSN  360
ALPVSPDSSV LIREGSSKMT VDPPSANGFP RVLQGQELLT LKGAFAESNE SDSSEKPMLW  420
PPSLDDEKIE LVPSSRRYGS DKWPPLGRRE SSFTDLLTGF GSQNKLSHEF CDNEVSKRQI  480
QEREGKFSLI GNAWSMMPSG LSLNLMDAGK KTHGQGPNAS YHTRGDIRYS GGFRDSMLPD  540
HRDGNQHVNR LMPPPNSPCL QMPPGHSREL QPNSVFAQDD NKKPKEALLQ GGDSGTCYFI  600
PTDGKKKKKW LTW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	0.0	ARF family protein